Teaching Material

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== Light Microscopy ==
 
== Light Microscopy ==
=== IFN Microscopy Course ===
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=== BioDIP Microscopy Course ===
 
* [[media:Microscopy_principles_guide.pdf|Basics of Microscopy (2008)]]
 
* [[media:Microscopy_principles_guide.pdf|Basics of Microscopy (2008)]]
 
* [[media:Ibarra_how-to-set-koehler-illumination.pdf|Köhler Illumination (2008)]]
 
* [[media:Ibarra_how-to-set-koehler-illumination.pdf|Köhler Illumination (2008)]]
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=== Companies' Resources ===
 
=== Companies' Resources ===
* [http://zeiss-campus.magnet.fsu.edu/index.html Zeiss Campus - Education in Microscopy and Digital Imaging - with flash tutorials
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* [http://zeiss-campus.magnet.fsu.edu/index.html Zeiss Campus - Education in Microscopy and Digital Imaging - with flash tutorials]
* [http://www.zeiss3d.de/C1256B5E0051569F/EmbedTitelIntern/Microscopy_from_the_very_beginning/$File/Microscopy_from_the_very_beginning.pdf Zeiss: Microscopy from the very Beginning]
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* [http://www.olympusmicro.com/index.html Olympus Microscopy Resources]
* [ftp://ftp.soft-imaging.de/brochures/pdf/EM/Basics_of_Light_microscopy.pdf Olympus: Basics of Light Microscopy]
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* [http://www.microscopyu.com/tutorials/java/ Nikon's interactive Java tutorials and demonstrations for many light microscopy techniques]
 
* [[media:OpticalFilters_EssentialTools_08-12-09.pdf| Optical Filters - Essential Tools by Dr. Michael Sommerauer (AHF)]]
 
* [[media:OpticalFilters_EssentialTools_08-12-09.pdf| Optical Filters - Essential Tools by Dr. Michael Sommerauer (AHF)]]
 
* [[media:OpticalFilters_SpecifyingFilters_08-12-09.pdf| Optical Filters - Specifying Filters by Dr. Michael Sommerauer (AHF)]]
 
* [[media:OpticalFilters_SpecifyingFilters_08-12-09.pdf| Optical Filters - Specifying Filters by Dr. Michael Sommerauer (AHF)]]
* [http://www.microscopyu.com/tutorials/java/ Nikon's interactive Java tutorials and demonstrations for many light microscopy techniques]
 
  
 
=== Other Resources ===
 
=== Other Resources ===
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== Image Processing ==
 
== Image Processing ==
 
=== IPF Image Processing Courses ===
 
=== IPF Image Processing Courses ===
* [[media:2010-12-Basics_of_Imaging_Processing_Course.pdf|What you need to know about Image Analysis - updated Dec 2010]]
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* [[media:2011-10-Basics_of_Imaging_Processing_Course.pdf|What you need to know about Image Analysis - updated Oct 2011]]
* [[media:QuantitativeColocAnalysis-12-2010.pdf‎|Quantitative Imaging for Colocalization Analysis (updated Dec 2010)]]
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* [[media:QuantitativeColocAnalysis-10-2011.pdf‎|Quantitative Imaging for Colocalization Analysis (updated Oct 2011)]]
 
* [[media:Intro-fiji-and-macros.pdf‎|Introduction to Fiji and Macro Programming (updated Jul 2011)]]
 
* [[media:Intro-fiji-and-macros.pdf‎|Introduction to Fiji and Macro Programming (updated Jul 2011)]]
 
* [http://fiji.sc/Category:Tutorials Fiji (is just ImageJ - batteries included) Tutorials]
 
* [http://fiji.sc/Category:Tutorials Fiji (is just ImageJ - batteries included) Tutorials]
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==High Content Screening==
 
==High Content Screening==
 
===DIPP course from the TDS of the MPI-CBG===
 
===DIPP course from the TDS of the MPI-CBG===
put the links to the uplloaded files here!
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* [[media:Presentations_TDD_DIPP2011.zip|Presentations about multifactorial experimental design, automated microscopy and image analysis - updated Oct 2011]]
  
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* [[media:Presentations_DIPP-course-TDS_2012_03.zip|Presentations about multifactorial experimental design, automated microscopy and image analysis - updated Mar 2012]]
  
 
== Other courses ==
 
== Other courses ==
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== Course schedules ==
 
== Course schedules ==
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* [[BasicCoursePhDProg - Basics in Light Microscopy - schedule April 2019]]
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* [[BasicCoursePhDProg - Basics in Light Microscopy - schedule April 2018]]
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* [[BasicCoursePhDProg - Peter Evennett - schedule September 2017]]
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* [[BasicCoursePhDProg - Peter Evennett - schedule December 2016]]
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* [[BasicCoursePhDProg - Peter Evennett - schedule April 2016]]
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* [[BasicCoursePhDProg - Peter Evennett - schedule March 2015]]
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* [[BasicCoursePhDProg - Peter Evennett - schedule October 2014]]
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* [[BasicsCoursePhDprog-PeterEvennett - schedule March 2014]]
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* [[BasicsCoursePhDprog-PeterEvennett - schedule Oct. 2013]]
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* [[BasicsCoursePhDprog-PeterEvennetApril2013]]
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* [[BasicsCoursePhDprog-PeterEvennetOctober2012]]
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* [[BasicsCoursePhDprog-PeterEvennetApril2012]]
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* [[BasicsCoursePhDprog-PeterEvennetOct2011-observed timing and needed materials]]
  
 
* [[BasicsCoursePhDprog-PeterEvennetMay2011-observed_timing]]
 
* [[BasicsCoursePhDprog-PeterEvennetMay2011-observed_timing]]

Revision as of 09:54, 1 November 2018

Contents

Cool Videos we made for teaching and information

Videos at Vimeo (in HD) These show Abbe's diffraction experiments (Peter Evennett), cool SPIM 3D reconstructions, and the effects of the confocal pinhole etc.

Light Microscopy

BioDIP Microscopy Course

add-on

Peter Evennett Microscopy Course

add-on

Companies' Resources

Other Resources

Related Sections

Image Processing

IPF Image Processing Courses

General Image Processing reading material

High Content Screening

DIPP course from the TDS of the MPI-CBG

Other courses

Matlab

See also the handouts of the Matlab for biologists course at the Light Microscopy Centre of the ETH Zürich and the materials of the Matlab programming course for Biophysicists at Universidad Autónoma de Madrid.

Course schedules

Personal tools