Fiji
From BioDIP
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ImageJ core already supports a couple of microscopy-specific file formats such as Zeiss lsm. Far more support can be added by installing [[Bio-Formats]]. | ImageJ core already supports a couple of microscopy-specific file formats such as Zeiss lsm. Far more support can be added by installing [[Bio-Formats]]. | ||
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+ | Fiji - just just imageJ (batteries included. It is an easily self updatable, and installable distrubution of imageJ with built in scripting, plugins and other cool stuff. | ||
A lot of analysis can be done using ImageJ, i.e. [[Colocalization]]. | A lot of analysis can be done using ImageJ, i.e. [[Colocalization]]. | ||
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*[http://rsb.info.nih.gov/ij website] | *[http://rsb.info.nih.gov/ij website] | ||
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+ | *[http://pacific.mpi-cbg.de Fiji - is just ImageJ (batteries incuded)] | ||
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*[http://www.macbiophotonics.ca McMaster Biophotonics Facility - plug-in bundle, ImageJ Manual] | *[http://www.macbiophotonics.ca McMaster Biophotonics Facility - plug-in bundle, ImageJ Manual] | ||
*[http://bigwww.epfl.ch/ Biomedical Imaging Group of EPFL - advanced plugins] | *[http://bigwww.epfl.ch/ Biomedical Imaging Group of EPFL - advanced plugins] |
Revision as of 11:17, 21 July 2009
Contents |
Overview
ImageJ core already supports a couple of microscopy-specific file formats such as Zeiss lsm. Far more support can be added by installing Bio-Formats.
Fiji - just just imageJ (batteries included. It is an easily self updatable, and installable distrubution of imageJ with built in scripting, plugins and other cool stuff.
A lot of analysis can be done using ImageJ, i.e. Colocalization.
Manuals
See ImageJ section for manuals.