Fiji

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[[Image:Imagej-coloc.jpg|thumb|ImageJ: colocalization analysis with automated threshold]]
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[[Image:Imagej-coloc.jpg|thumb|Fiji/ImageJ: colocalization analysis with automated threshold]]
 
== Overview ==
 
== Overview ==
  
== Installation ==
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Fiji - Fiji is just imageJ (batteries included). An easily self updatable, and installable distrubution of imageJ with built in scripting, plugins and other cool stuff. A lot of analysis can be done using Fiji/ImageJ, i.e. [[Colocalization]].
 
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Download ImageJ core program (see [[links]]) and install it.
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== Manuals ==
 
== Manuals ==
  
See [[:category:ImageJ|ImageJ section]] for manuals.
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Manuals about how to use Fiji/ImageJ are available on various websites. Please check the links.
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== Links ==
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*[http://fiji.sc Fiji website]<br>Fiji is just ImageJ (batteries incuded) - download, wiki, manuals
  
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*[http://rsb.info.nih.gov/ij ImageJ website]<br>plugins, manuals
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*[https://www.macbiophotonics.ca/software.htm McMaster Biophotonics Facility]<br>plug-in bundle, ImageJ manual
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*[http://bigwww.epfl.ch/algorithms.html Biomedical Imaging Group of EPFL]<br>advanced plugins
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*[http://en.wikipedia.org/wiki/Imagej ImageJ @ Wikipedia]
  
  
 
[[category:Encyclopedia]]
 
[[category:Encyclopedia]]
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[[category:software-db]]

Latest revision as of 15:50, 28 November 2013

Fiji/ImageJ: colocalization analysis with automated threshold

[edit] Overview

Fiji - Fiji is just imageJ (batteries included). An easily self updatable, and installable distrubution of imageJ with built in scripting, plugins and other cool stuff. A lot of analysis can be done using Fiji/ImageJ, i.e. Colocalization.

[edit] Manuals

Manuals about how to use Fiji/ImageJ are available on various websites. Please check the links.

[edit] Links

  • Fiji website
    Fiji is just ImageJ (batteries incuded) - download, wiki, manuals
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