Fiji
From BioDIP
(Difference between revisions)
(added fiji links and info) |
|||
| Line 7: | Line 7: | ||
ImageJ core already supports a couple of microscopy-specific file formats such as Zeiss lsm. Far more support can be added by installing [[Bio-Formats]]. | ImageJ core already supports a couple of microscopy-specific file formats such as Zeiss lsm. Far more support can be added by installing [[Bio-Formats]]. | ||
| + | |||
| + | Fiji - just just imageJ (batteries included. It is an easily self updatable, and installable distrubution of imageJ with built in scripting, plugins and other cool stuff. | ||
A lot of analysis can be done using ImageJ, i.e. [[Colocalization]]. | A lot of analysis can be done using ImageJ, i.e. [[Colocalization]]. | ||
| Line 17: | Line 19: | ||
*[http://rsb.info.nih.gov/ij website] | *[http://rsb.info.nih.gov/ij website] | ||
| + | |||
| + | *[http://pacific.mpi-cbg.de Fiji - is just ImageJ (batteries incuded)] | ||
| + | |||
*[http://www.macbiophotonics.ca McMaster Biophotonics Facility - plug-in bundle, ImageJ Manual] | *[http://www.macbiophotonics.ca McMaster Biophotonics Facility - plug-in bundle, ImageJ Manual] | ||
*[http://bigwww.epfl.ch/ Biomedical Imaging Group of EPFL - advanced plugins] | *[http://bigwww.epfl.ch/ Biomedical Imaging Group of EPFL - advanced plugins] | ||
Revision as of 11:17, 21 July 2009
Contents |
Overview
ImageJ core already supports a couple of microscopy-specific file formats such as Zeiss lsm. Far more support can be added by installing Bio-Formats.
Fiji - just just imageJ (batteries included. It is an easily self updatable, and installable distrubution of imageJ with built in scripting, plugins and other cool stuff.
A lot of analysis can be done using ImageJ, i.e. Colocalization.
Manuals
See ImageJ section for manuals.
