Biopolis Dresden Imaging Platform

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[[image:spim.jpg|thumb|An E9.5 mouse embryo stained for its blood vessels as illustrated by single plane illumination light microscopy (B. Strilic and E. Lammert, MPI-CBG).]]
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[[File:DDC-09.png|right|150px|link=http://www.dresden-concept.de/]] The '''Bio'''polis '''D'''resden '''I'''maging '''P'''latform (BioDIP) as a project within the [http://www.dresden-concept.de/ DRESDEN-concept e.V.] constitutes a multi-institutional network of 8 core light- and electron microscopy facilities
[[image:ifn-community-logo.jpg]][[image:imagingnetwork_header2.jpg]]
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;Welcome!<br>
 
... to the Imaging Facility Network (IFN) Dresden. We are a group of facilities providing access to advanced microscopy systems. The goal of this network is to join our forces and bring our knowledge and equipment closer together.
 
  
This wiki is currently under development, but should sooner or later substitute the IFN website.
 
  
== Announcements ==
 
  
;2008-06-02 | MTZ Imaging | extended time-frame - night bookings possible
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<div cellspacing="5" style="width: 20em; font-size: 90%; text-align:left; float:right; position:relative; border:1px; border-style:solid;">
*Based on user requests, we extended the allowed time-frame for the MTZ Imaging systems. It is now possible to book the microscopes 24/7. The scheduling database is already adjusted accordingly. Please take in account that the daytime is now "compressed" since more hours have to fit in the same space. The air condition in the Zeiss room is also set to over night, and it will be done for the Leica room asap. As usual, feel free to contact us if you have questions.
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<b>News</b><br />
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{{#ask: [[Category:news]] [[include::Yes]]
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{|
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|width=220|
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[[file: Lix-LOGO-imaging-colored.png|center|thumb| Imaging@BIOTEC/CRTD|150px|link=Imaging@BIOTEC/CRTD]]
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|width=220|
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[[file: MPI-CBG-Lmf-logo-big.png|center|thumb|MPI-CBG LMF|150px|link=MPI-CBG_LMF]]
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| width=220|
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[[file:DZNE-Imaging-logo2-v6.png|center|thumb|DZNE – Imaging Platform|150px|link=DZNE_-_Imaging_Platform]]
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|width=220|
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[[file: BIOTEC-IP-LOGO.png |center|thumb|Image Processing@BIOTEC|150px|link= Image_Processing@BIOTEC]]
  
  
== Resources ==
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{|
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[[file: EM_Facility_Logo_200.jpg|center|thumb|MPI-CBG EM|150px|link=MPI-CBG_EM]]
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|width=220|
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[[file: EM facility logo-1.jpg |center|thumb| EM-and Histo-Facility CRTD/BIOTEC|150px|link= EM-_and_Histo-Facility_CRTD_/_BIOTEC]]
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|width=220|
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[[file: TDS-logo.png|center|thumb|MPI-CBG TDS|150px|link=MPI-CBG_TDS]]
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|width=220|
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[[file: Logo mtz 3.png|center|thumb|MTZ Imaging|150px|link=MTZ_Imaging]]
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|}
  
<div style="column-count:3;-moz-column-count:3;-webkit-column-count:3">
 
* [[Teaching Material]]
 
* [[Technical Information]]
 
* [[Links]]
 
* [[Papers]]
 
* [https://info.med.tu-dresden.de/MTZimaging/index.php/Spezial:AWCforum Forum]
 
* [https://docs.google.com Google Docs]
 
</div>
 
  
 
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belonging to five research institutions: Center for Regenerative Therapies (CRTD), Biotechnology Center of the TU-Dresden (BIOTEC), Max Planck Institute for Molecular Cell Biology and Genetics (MPI-CBG), Medical Theoretical Center of the Medical Faculty of the TU-Dresden (MTZ) and the German Center for Neurodegenerative Diseases (DZNE) within the Helmholtz Association.
{| style="width:100%"
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{|
|width="25%"| '''MPI-CBG Light Microscopy Facility'''
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|width=220|
|width="25%"| '''MTZ Imaging'''
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[[File:CRTD logo.PNG|center|thumb|CRTD|200x80px|link=http://www.crt-dresden.de/]]
|width="25%"| '''imaging@biotec'''
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|width=220|
|width="25%"| '''MPI-CBG Image Processing Facility'''
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[[File:Biotec_logo.png|center|thumb|BIOTEC|200x80px|link=http://www.biotec.tu-dresden.de/de/home.html]]
|-
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|width=220|
| [https://intradb.mpi-cbg.de/lmf/cgi-bin/index.py Scheduling Database]
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[[File:Logo_MPI-CBG.jpg |center|thumb|MPI-CBG|200x80px|link=http://www.mpi-cbg.de/]]
| [https://cgc.med.tu-dresden.de/phpScheduleIt Scheduling Database]
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| width=220|
| [http://techpool.biotec.tu-dresden.de/schedule Scheduling Database]
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[[File:Logo_Medizin.png|center|thumb|MTZ|200x80px|link=http://tu-dresden.de/die_tu_dresden/fakultaeten/medizinische_fakultaet/mtz/]]
| [https://intradb.mpi-cbg.de/imagepro Scheduling Database]
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|width=220|
|-
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[[File:Logo-DZNE.jpg |center|thumb|DZNE|200x80px|link=http://www.dzne.de/en/sites/dresden.html]]
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[[File:DFG_zweizeilig_blau.png|right|200px|alt=The DFG logo is displayed.|link=http://www.dfg.de/en/research_funding/index.html]]
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The BioDIP had been funded from 2013-2019 by the '''German Research Foundation [http://www.dfg.de/en/dfg_profile/index.jsp DFG]''' (Deutsche Forschungsgemeinschaft) as imaging "core facility" (DFG Gerätezentrum, [http://www.dfg.de/service/presse/pressemitteilungen/2012/pressemitteilung_nr_07/index.html press release]).
  
<div style="column-count:4;-moz-column-count:4;-webkit-column-count:4">
 
;MPI-CBG Light Microscopy Facility
 
*[https://intradb.mpi-cbg.de/lmf/cgi-bin/index.py Scheduling Database]
 
*[http://www.mpi-cbg.de/resources/services/lm/index.html Website]
 
;MTZ Imaging
 
*[https://cgc.med.tu-dresden.de/phpScheduleIt Scheduling Database]
 
*[http://tu-dresden.de/med/mtzImaging Website]
 
*[https://info.med.tu-dresden.de/webdav/mtzimaging Fileserver]
 
;imaging@biotec
 
*[http://techpool.biotec.tu-dresden.de/schedule Scheduling Database]
 
*[http://www.biotec.tu-dresden.de/techpool/microscopy.html Website]
 
;MPI-CBG Image Processing Facility
 
*[https://intradb.mpi-cbg.de/imagepro Scheduling Database]
 
</div>
 
  
  
== Equipment ==
 
  
* [[Equipment]]
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=Mission=
* [http://baseportal.de/cgi-bin/baseportal.pl?htx=/ifn/equipment/equipment Equipment Database]
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The BioDIP is a network of core facilities providing '''open access''' to Advanced Microscopy Systems and Image Processing. We do serve internal as well as external users. The goal of this network is to join our forces and to bring our knowledge and equipment closer together. This Wiki serves as the central resource for all necessary information regarding our network. Here you can find the appropriate [[Teaching_Material|teaching material]] for our courses, [[Special:RunQuery/equipment_query|search]] for a microscope of interest and find [[Links|links]] to useful external resources.
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In case that you wish to run an imaging project using one of our facilities, please feel free to use the [[Special:Contact|contact form]] to get in touch with us! We will be happy to guide you to the right BioDIP facility and the respective imaging expert.
  
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==News in the Network==
  
== The Network ==
 
  
<div style="column-count:3;-moz-column-count:3;-webkit-column-count:3">
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====The conference [http://www.biodip.de/tim2016 "Trends in Microscopy"] 2016 entitled "Grasping higher Dimensions" will take place at the CRTD! BioDIP in collaboration with German BioImaging is organizing the event supported by the DFG.====
* [[Members]]
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* [[Registration]]
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====BioDIP equipment is included in the database of the [https://tp.dresden-concept.de Technology Platform] within the [http://www.dresden-concept.de/ DRESDEN-concept e.V.].====
* [http://tu-dresden.de/med/ifn IFN Website]
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* [http://maps.google.de/maps/ms?hl=de&gl=de&ptab=2&ie=UTF8&oe=UTF8&msa=0&msid=106539158155859787719.00044ec3bf62983e46df9 IFN @ Google Maps]
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[[File:Euro-BioImaging_banner.jpg|right|300px|alt=The Euro-BioImaging logo is displayed.|link=http://www.eurobioimaging.eu/]]
</div>
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====BioDIPs expression of interest got <span style="color:green">highest ranking</span> as <span style="color:green">"Highly recommended Expression of Interest for Euro-BioImaging Node"</span> by the Independent EUBI Evaluation Board.====
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====Supported by the [http://www.dresden-concept.de/ DRESDEN-concept e.V.] the BioDIP did express its interest to become a General Access Node for advanced microscopy within the Euro-BioImaging network. Find [http://www.eurobioimaging.eu/content-news/outcome-1st-call-euro-bioimaging-nodes here] more information about the results of the 1st Open Call for Nodes.====
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[[File:DDC-09.png|right|150px|link=http://www.dresden-concept.de/]]
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====BioDIP is a project of [http://www.dresden-concept.de/de/initiative/projekte.html DRESDEN-concept e.V.].====
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====BioDIP served as a [http://www.eurobioimaging.eu Euro-BioImaging] Proof-of-Concept site.====
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[[File:Logo-GerBI-final_bgwhite.png|right|150px|link=http://www.germanbioimaging.org]]
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====BioDIP is a member of the [http://www.germanbioimaging.org German Bioimaging] project.====
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== Related Wikis ==
 +
 
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* [https://wiki.mpi-cbg.de/wiki/imagepro/index.php/Main_Page IPF Wiki]
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* [http://fiji.sc Fiji Wiki] Fiji is just ImageJ - Batteries Included
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* [http://openspim.org Open SPIM project Wiki]
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* [https://spim.mpi-cbg.de SPIM Wiki]
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== Internal ==
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* [https://docs.google.com Google Docs]
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* [[New-website-optimization]]
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* [[BioDIP future development]]
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== User feedback ==
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* [[bugs]]
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__NOTOC__

Latest revision as of 11:11, 9 January 2023

DDC-09.png
The Biopolis Dresden Imaging Platform (BioDIP) as a project within the DRESDEN-concept e.V. constitutes a multi-institutional network of 8 core light- and electron microscopy facilities



Imaging@BIOTEC/CRTD
MPI-CBG LMF
DZNE – Imaging Platform
Image Processing@BIOTEC


MPI-CBG EM
EM-and Histo-Facility CRTD/BIOTEC
MPI-CBG TDS
MTZ Imaging


belonging to five research institutions: Center for Regenerative Therapies (CRTD), Biotechnology Center of the TU-Dresden (BIOTEC), Max Planck Institute for Molecular Cell Biology and Genetics (MPI-CBG), Medical Theoretical Center of the Medical Faculty of the TU-Dresden (MTZ) and the German Center for Neurodegenerative Diseases (DZNE) within the Helmholtz Association.

CRTD
BIOTEC
MPI-CBG
MTZ
DZNE
The DFG logo is displayed.

The BioDIP had been funded from 2013-2019 by the German Research Foundation DFG (Deutsche Forschungsgemeinschaft) as imaging "core facility" (DFG Gerätezentrum, press release).



[edit] Mission

The BioDIP is a network of core facilities providing open access to Advanced Microscopy Systems and Image Processing. We do serve internal as well as external users. The goal of this network is to join our forces and to bring our knowledge and equipment closer together. This Wiki serves as the central resource for all necessary information regarding our network. Here you can find the appropriate teaching material for our courses, search for a microscope of interest and find links to useful external resources. In case that you wish to run an imaging project using one of our facilities, please feel free to use the contact form to get in touch with us! We will be happy to guide you to the right BioDIP facility and the respective imaging expert.

[edit] News in the Network

[edit] The conference "Trends in Microscopy" 2016 entitled "Grasping higher Dimensions" will take place at the CRTD! BioDIP in collaboration with German BioImaging is organizing the event supported by the DFG.

[edit] BioDIP equipment is included in the database of the Technology Platform within the DRESDEN-concept e.V..

The Euro-BioImaging logo is displayed.

[edit] BioDIPs expression of interest got highest ranking as "Highly recommended Expression of Interest for Euro-BioImaging Node" by the Independent EUBI Evaluation Board.

[edit] Supported by the DRESDEN-concept e.V. the BioDIP did express its interest to become a General Access Node for advanced microscopy within the Euro-BioImaging network. Find here more information about the results of the 1st Open Call for Nodes.

DDC-09.png

[edit] BioDIP is a project of DRESDEN-concept e.V..

[edit] BioDIP served as a Euro-BioImaging Proof-of-Concept site.

Logo-GerBI-final bgwhite.png

[edit] BioDIP is a member of the German Bioimaging project.

[edit] Related Wikis

[edit] Internal

[edit] User feedback


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